Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs143175926 chr21:47219354 ATTG/A HMX1 chr4:8847802-8873543:- 0.39 6.23 1.25E-9 Box Plot
BLCA rs143254339 chr10:51807458 T/G FAM21B chr10:47894023-47949412:+ 0.41 6.11 2.39E-9 Box Plot
BLCA rs1433811 chr9:18760684 C/T ANXA2P3 chr10:66585329-66586336:+ 0.34 6.34 6.29E-10 Box Plot
BLCA rs1433811 chr9:18760684 C/T ATP5EP2 chr13:28519343-28519727:+ 0.35 6.49 2.68E-10 Box Plot
BLCA rs1433811 chr9:18760684 C/T FLJ44635 chrX:71364034-71381599:+ 0.37 6.69 8.05E-11 Box Plot
BLCA rs1433811 chr9:18760684 C/T POU2F1 chr1:167190066-167396582:+ 0.42 7.11 5.75E-12 Box Plot
BLCA rs1433811 chr9:18760684 C/T RPL19P12 chr7:102781796-102782386:- 0.38 6.81 3.72E-11 Box Plot
BLCA rs1435623 chr12:72146221 T/C SNORA8 chrX:132286782-132286920:+ 0.74 6.63 1.16E-10 Box Plot
BLCA rs143608175 chr8:3916503 C/G SSX5 chrX:48045656-48056199:- -0.52 -5.97 5.49E-9 Box Plot
BLCA rs143618681 chr6:28293408 G/GC ZFP57 chr6:29640169-29648887:- 0.7 6.18 1.64E-9 Box Plot
BLCA rs1437973 chr2:101104930 G/A LOC285359 chr3:101431278-101432259:+ 0.34 6.09 2.72E-9 Box Plot
BLCA rs143847421 chr11:63894249 T/TGACC SBSN chr19:36014269-36019253:- -0.49 -6.1 2.57E-9 Box Plot
BLCA rs143979002 chr2:124831260 A/AAG KCNK16 chr6:39282474-39290744:- 0.28 6.19 1.54E-9 Box Plot
BLCA rs144175088 chr15:91534350 TAC/T LEPR chr1:65886335-66107242:+ 0.73 6.04 3.57E-9 Box Plot
BLCA rs1441787 chr8:20796299 A/C ENTPD4 chr8:23243296-23315208:- -0.49 -6.37 5.37E-10 Box Plot